Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904301.1_cds_XP_016454450.1_48477
CDS Infomation

[gene=LOC107778679] [db_xref=GeneID:107778679] [protein=rho guanine nucleotide exchange factor 8-like] [protein_id=XP_016454450.1] [location=complement(join(105833..106177,106252..106572,106651..106917,106994..107068,107145..107299,107447..107563,107677..107950))] [gbkey=CDS]
Sequence

ATGGTTAACGAAGAAAATAAGATTCAGAAGTCGAGGTCTTTCAATTTTAGGAAGATATTT
GAGATTCCAAGTAGATTGGCACAGAGCATTGGGGGGGAGAGTGATAGTGATGAAGAGGAC
ATGGATAACAACATTGGAAACGTCCAATTTATTAGCCAAGGCGGAACAACGTCTGTACCT
TTAGAAAATCATCAGATGGATAATGAACCTGTTTCAAGCTTAACCCAGGATGCAGCTAAG
GCAGGAAATACCCAAAAAGATAAAGAACCTACAGACATGGAGTTGATGAAAGAAAGATTT
GCAAAGCTGCTTTTAGGGGAGGATATGTCAGGAGGAGGAAAAGGTGTTTCATCAGCTCTG
GCTTTATCAAACGCCATTACCAATCTAGCTGCTTCTGTTTTTGGAGAACAATCGAAATTG
GAGCCTATGTCTCAAAAGAGAAAAGAGAGGTGGAGAAAAGAAATCGACTGGCTATTATCT
GTGACAGATTACATTGTTGAGTTTATCCCCGCGCAACAAAAATCAAAAGATGGAACAAAC
ATGGAGATAATGGTTACTCAACAAAGAAGAGATCTGCTCATGAACATCCCTGCTCTGAAG
AAGCTTGATGCAATGCTCATTGACTGCTTAGATAACTTCAAAGATGCAAAAGAATTCTGG
TATGTCTCGAGAGATGCTGAAGAATCTGAGAAAGGTGTCCAGAGGACTGATAAATGGTGG
CTACCTACAATCAAGGTTCCACCTGAGGGACTCTCAGATGCTTCCCGGAGATGGCTACAA
TATCAGAAGGATTGTGTGAACCAAGTACTCAAAGCATCCATGGCGATTAACGCTCAAATA
CTAGCAGAAATGGAAGTCCCTGAAAACTACATTGAATCTCTCCCCAAGAATGGTAGATCA
AGTCTTGGTGATTCAATCTACAAGAACATCACGGTCGAATTCTTTGATCCAGAACTATTC
CTTTCAACCATGGATATGTCATCAGAACACAAAGTTCTTGACCTTAAAAACAGAATTGAA
GCATCTATTGTGATTTGGAAGAGGAAGATGCACCAAAAAGATGGAAAATCTTCCTGGGTT
CCAGCTGTGAGTTTGGAGAAGAGGGAGCTCTTTGAAGAGAGAGCAGAGACTATCTTACTC
CTGCTAAAACACAGATTTCCTGGAATTCCTCAATCTTCCCTCGAGATCAGTAAAATCCAA
TATAACAGAGATGTGGGACATGCTGTTCTGGAGAGCTACTCAAGGGTGCTAGAAAGCCTA
GCCAACACAGTTATGTCGCGTATTGAGGATGTCCTATACGCAGATTCTGTCACACAAGAT
CCATCACTTGCGATAGCAAAGTGGAACCCTTCAGCTGAATCTTCACCTCAGCAACCACTA
AGTGGAATGTCAACTCCCAGGGGAGAGTCAGAGATGTTAAGTTCTGCAGCAGAAACACCA
ACCTCAATGACCTTGTCCGATTTCATGGGGTGGAATATGGAGCAGGGAGAGGGAGACATA
AGAATCAGGAAACTTTTTGCCCAAGATGATAATGAAAAATCCATGCAACGATAA

Peptide Sequence

PEP ID

XP_016454450.1
PEP Infomation

PREDICTED: rho guanine nucleotide exchange factor 8-like [Nicotiana tabacum]
Sequence

MVNEENKIQKSRSFNFRKIFEIPSRLAQSIGGESDSDEEDMDNNIGNVQFISQGGTTSVP
LENHQMDNEPVSSLTQDAAKAGNTQKDKEPTDMELMKERFAKLLLGEDMSGGGKGVSSAL
ALSNAITNLAASVFGEQSKLEPMSQKRKERWRKEIDWLLSVTDYIVEFIPAQQKSKDGTN
MEIMVTQQRRDLLMNIPALKKLDAMLIDCLDNFKDAKEFWYVSRDAEESEKGVQRTDKWW
LPTIKVPPEGLSDASRRWLQYQKDCVNQVLKASMAINAQILAEMEVPENYIESLPKNGRS
SLGDSIYKNITVEFFDPELFLSTMDMSSEHKVLDLKNRIEASIVIWKRKMHQKDGKSSWV
PAVSLEKRELFEERAETILLLLKHRFPGIPQSSLEISKIQYNRDVGHAVLESYSRVLESL
ANTVMSRIEDVLYADSVTQDPSLAIAKWNPSAESSPQQPLSGMSTPRGESEMLSSAAETP
TSMTLSDFMGWNMEQGEGDIRIRKLFAQDDNEKSMQR

Transcript Sequence

Gene sequence data has not been registered.